Problems and Technical Issues with Rosetta@home

Author	Message
Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 90685 - Posted: 17 Apr 2019, 22:25:50 UTC Validation seems to be offline for the last half hour ID: 90685 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 90686 - Posted: 18 Apr 2019, 0:24:03 UTC - in response to Message 90685. Validation seems to be offline for the last half hour And back about 30mins ago, I think ID: 90686 · Rating: 0 · rate: / Reply Quote

Bryn Mawr Send message Joined: 26 Dec 18 Posts: 394 Credit: 12,127,757 RAC: 4,390	Message 90706 - Posted: 21 Apr 2019, 20:44:07 UTC - in response to Message 90686. Validation seems to be offline for the last half hour And back about 30mins ago, I think And off again since 04:00 this morning ID: 90706 · Rating: 0 · rate: / Reply Quote

Trevor ct Send message Joined: 7 Oct 14 Posts: 2 Credit: 23,386,023 RAC: 0	Message 90964 - Posted: 2 Aug 2019, 15:19:23 UTC Rosetta 4.07 work tasks are reporting 'computational error' immediately they are opened on one of my two computers. Only known difference is affected computer BOINC version is 7.14.2 and the non-affected is earlier version 7.6.33. I cannot discover how to revert version as a trial. Trevor ct ID: 90964 · Rating: 0 · rate: / Reply Quote

Jim1348 Send message Joined: 19 Jan 06 Posts: 881 Credit: 52,257,545 RAC: 0	Message 90965 - Posted: 2 Aug 2019, 16:14:58 UTC - in response to Message 90964. Rosetta 4.07 work tasks are reporting 'computational error' immediately they are opened on one of my two computers. Only known difference is affected computer BOINC version is 7.14.2 and the non-affected is earlier version 7.6.33. It is not the BOINC version. I see the errors too (one on each of two Ubuntu machines), and they are both running BOINC 7.14.2. ID: 90965 · Rating: 0 · rate: / Reply Quote

LarryMajor Send message Joined: 1 Apr 16 Posts: 22 Credit: 31,533,212 RAC: 0	Message 90966 - Posted: 2 Aug 2019, 20:47:19 UTC - in response to Message 90965. Yeah, I got a bunch of these on different machines, and they all fail when they are resent to someone else. It's the work units, not your computer. ID: 90966 · Rating: 0 · rate: / Reply Quote

Trevor ct Send message Joined: 7 Oct 14 Posts: 2 Credit: 23,386,023 RAC: 0	Message 90968 - Posted: 3 Aug 2019, 21:30:12 UTC - in response to Message 90966. Thank you. Comforting I am not running a rogue program. ID: 90968 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 90972 - Posted: 5 Aug 2019, 4:00:19 UTC Current server status rah_assimilator_rosetta1 (rosetta) bwsrv2 Running rah_assimilator_rosetta2 (rosetta) bwsrv2 Not Running rah_assimilator_mini1 (minirosetta) bwsrv2 Not Running rah_assimilator_mini2 (minirosetta) bwsrv2 Running rah_validator_rosetta1 (rosetta) bwsrv2 Not Running rah_validator_rosetta2 (rosetta) bwsrv2 Running rah_validator_mini1 (minirosetta) bwsrv2 Not Running rah_validator_mini2 (minirosetta) bwsrv2 Running file_deleter1 bwsrv2 Running file_deleter2 bwsrv2 Running db_purge bwsrv2 Not Running Workunits waiting for validation 2057 Workunits waiting for assimilation 1031 I have some unvalidated tasks held up here - while others go straight through. Any chance of a bump please? ID: 90972 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 90976 - Posted: 5 Aug 2019, 16:40:26 UTC - in response to Message 90972. The whole of Server BWSRV2 is not running right now. Hopefully that means it's being worked on Workunits waiting for validation 62381 Workunits waiting for assimilation 11088 ID: 90976 · Rating: 0 · rate: / Reply Quote

JohnH Send message Joined: 25 Mar 13 Posts: 43 Credit: 2,319,355 RAC: 0	Message 90977 - Posted: 5 Aug 2019, 17:57:43 UTC rah_assimilator_rosetta1 (rosetta) bwsrv2 Not Running rah_assimilator_rosetta2 (rosetta) bwsrv2 Not Running rah_assimilator_mini1 (minirosetta) bwsrv2 Not Running rah_assimilator_mini2 (minirosetta) bwsrv2 Not Running rah_validator_rosetta1 (rosetta) bwsrv2 Not Running rah_validator_rosetta2 (rosetta) bwsrv2 Not Running rah_validator_mini1 (minirosetta) bwsrv2 Not Running rah_validator_mini2 (minirosetta) bwsrv2 Not Running file_deleter1 bwsrv2 Not Running file_deleter2 bwsrv2 Not Running db_purge bwsrv2 Not Running Anybody minding the store ??? ID: 90977 · Rating: 0 · rate: / Reply Quote

[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1995 Credit: 9,653,827 RAC: 7,305	Message 90979 - Posted: 5 Aug 2019, 20:09:39 UTC - in response to Message 90977. Anybody minding the store ??? Maybe all the people is here: RosettaCon 2019 ID: 90979 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 90983 - Posted: 6 Aug 2019, 0:20:53 UTC - in response to Message 90979. Anybody minding the store ??? Maybe all the people is here: RosettaCon 2019 Oh! Could be. Meanwhile... Workunits waiting for validation 111762 Workunits waiting for assimilation 12405 ID: 90983 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 90993 - Posted: 6 Aug 2019, 20:44:56 UTC - in response to Message 90976. The whole of Server BWSRV2 is not running right now. Hopefully that means it's being worked on Workunits waiting for validation 62381 Workunits waiting for assimilation 11088 Aaaannnnddd... we're back. Sort of. bwsvr2 running, validation all up to date, assimilation not yet but I don't actually know what that does tbh Workunits waiting for validation 6 Workunits waiting for assimilation 61639 ID: 90993 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 91308 - Posted: 28 Oct 2019, 10:25:23 UTC BWSRV2 not running and seems to have been down for 5 or 6 hours. Task validation is building up - currently at 49905 ID: 91308 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 91312 - Posted: 29 Oct 2019, 10:35:30 UTC - in response to Message 91308. BWSRV2 not running and seems to have been down for 5 or 6 hours. Task validation is building up - currently at 49905 Noticed earlier this morning everything's back running and all my validation is caught up. Thanks for fixing. ID: 91312 · Rating: 0 · rate: / Reply Quote

danny Send message Joined: 2 Nov 19 Posts: 1 Credit: 0 RAC: 0	Message 91328 - Posted: 2 Nov 2019, 18:36:32 UTC - in response to Message 80897. Excellent. Thanks. ID: 91328 · Rating: 0 · rate: / Reply Quote

Stevie G Send message Joined: 15 Dec 18 Posts: 107 Credit: 842,208 RAC: 1,004	Message 91353 - Posted: 11 Nov 2019, 15:10:00 UTC Rosetta is doing it again. Lots of wasted computer time and it's pissing me off. 1104110555 993281955 3551508 11 Nov 2019, 3:13:36 UTC 11 Nov 2019, 14:03:47 UTC Error while computing 32,815.09 29,296.58 --- Rosetta v4.07 windows_x86_64 windows_intelx86 1102262280 992814189 3551508 30 Oct 2019, 13:29:52 UTC 31 Oct 2019, 8:17:27 UTC Error while computing 31,262.13 29,037.15 --- Rosetta v4.07 windows_x86_64 1102262227 992814166 3551508 30 Oct 2019, 13:29:52 UTC 4 Nov 2019, 18:17:19 UTC Error while computing 33,356.00 29,107.82 --- Rosetta v4.07 windows_x86_64 Steven Gaber Oldsmar, FL ID: 91353 · Rating: 0 · rate: / Reply Quote

benefique pour tous Send message Joined: 12 Oct 19 Posts: 2 Credit: 2,629,601 RAC: 0	Message 91469 - Posted: 19 Dec 2019, 7:55:48 UTC - in response to Message 80621. I must put 3 of my computers at cleaning The perform is Under usual hability to compute It overheat same with only 40% of processors with only 25 % power for each processors now came the time to eliminate the dust I am happy because the cruncher solved over 12 millions tasks this year Happy Crunching Happy Christmas feasts Guy PFLIEGER ID: 91469 · Rating: 0 · rate: / Reply Quote

Hal Bregg Send message Joined: 16 Sep 18 Posts: 2 Credit: 418,479 RAC: 0	Message 91546 - Posted: 13 Jan 2020, 22:31:24 UTC One of the WUs errored out after 5hrs of running. It should run around 1 hour as per project settings. Name rb_01_09_13386_13515_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_07_11_885102_10_1 Exit status 139 (0x0000008B) Unknown error code <core_client_version>7.9.3</core_client_version> <![CDATA[ <message> process got signal 11</message> <stderr_txt> command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_4.07_i686-pc-linux-gnu @rb_01_09_13386_13515_ab_t000__robetta_FLAGS -in::file::fasta t000_.fasta -psipred_ss2 t000_.spider3_ss2 -kill_hairpins t000_.nobuformat.spider3_ss2 -jumps:pairing_file t000_.fasta.bbcontacts.jumps -abinitio::use_filters false -skip_convergence_check -jumps:overlap_chainbreak -seq_sep_stages 1 1 1 -ramp_chainbreaks -sep_switch_accelerate 0.8 -jumps:random_sheets 5 4 1 -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 5.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 5.0 -in:file:boinc_wu_zip rb_01_09_13386_13515_ab_t000__robetta.zip -frag3 rb_01_09_13386_13515_ab_t000__robetta.200.3mers.index.gz -fragA rb_01_09_13386_13515_ab_t000__robetta.200.11mers.index.gz -fragB rb_01_09_13386_13515_ab_t000__robetta.200.7mers.index.gz -nstruct 10000 -cpu_run_time 28800 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1009779 Starting watchdog... Watchdog active. BOINC:: CPU time: 18038.9s, 14400s + 3600s[2020- 1-13 6:54: 3:] :: BOINC WARNING! cannot get file size for default.out.gz: could not open file. Output exists: default.out.gz Size: -1 InternalDecoyCount: 0 (GZ) ----- 0 ----- Stream information inconsistent. Writing W_0000001 ====================================================== DONE :: 1 starting structures 18038.9 cpu seconds This process generated 1 decoys from 1 attempts ====================================================== 06:54:03 (24943): called boinc_finish(0) </stderr_txt> ]]> ID: 91546 · Rating: 0 · rate: / Reply Quote

Sid Celery Send message Joined: 11 Feb 08 Posts: 2127 Credit: 41,266,340 RAC: 8,573	Message 91549 - Posted: 15 Jan 2020, 2:33:31 UTC New tasks are a bit stopstart today. No tasks earlier today, then a batch of new ones came through, but empty again right now. ID: 91549 · Rating: 0 · rate: / Reply Quote